Bioconductor
Materials from class on Monday, February 22, 2021
Slides
Bioconductor introduction
biostrings.R - BioStrings demo
Genomic ranges
genomicRanges.R - GenomicRanges demo. Other demos: ranges.Rmd, GRL.Rmd
Annotations
annotation.R - working with annotation packages. biomaRt.R - interacting with biomaRt databases.
Summarized Experiment
SummarizedExperiment.R - Creating SummarizedExperiment. airway_data.zip - data for summarizedExperiment.