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Cancer Bioinformatics
Cancer Bioinformatics
  • Syllabus
  • Schedule
  • Readings
  • Classes
Class sessions
  • Biology Intro
  • Unix/Linux
  • Genomic technologies
  • Genomic resources
  • Alignment algorithms
  • Bioconductor
  • RNA-seq
  • Methods for genomics data analysis
  • Functional enrichment analysis
  • Clustering
  • Epigenomics, methylation
  • ChIP=seq
  • scRNA-seq
  • Metagenomics
  • Genomic variation
  • Hi-C
  • Final project

Genomic variation

Materials from class on Wednesday, April 28, 2021

Slides

Single Nucleotide Polymorphisms

Lecture slides in PDF format

Structural and Copy Number Variants

Lecture slides in PDF format

Genome-Wide Association Studies

Lecture slides in PDF format

eQTLs - expression quantitative trait loci

Lecture slides in PDF format

Last updated on May 3, 2021

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BIOS 691: Cancer Bioinformatics (Spring 2021)
Virginia Commonwealth University    Biostatistics Graduate Program

Dr. Mikhail Dozmorov    mdozmorov@vcu.edu

Monday, Wednesday    9:00am – 10:20sm
Online

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Content 2021 MGD

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